Publications 2016

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Mukai, T., Vargas-Rodriguez, O., Englert, M., Tripp, H.J., Ivanova, N.N., Rubin, E.M., Kyrpides, N.C. and Söll, D. (2016) Transfer RNAs with novel cloverleaf structures. Nucl. Acids Res., October 05, doi: 10.1093/nar/gkw898


Vinyard, D., Reesbeck, M., Suzuki, T., Manakongtreecheep, K., Holland, P., Brudvig, G., Söll, D. and Liu, Y. (2016) The unusual [3Fe-4S] cluster required for tRNA thiolation in archaea and eukaryotes. Proc. Natl. Acad. Sci. USA, October 24, doi: 10.1073/pnas.1615732113.


Yang, A., Ha, S., Ahn, J., Kim, R., Kim, S., Lee, Y., Kim, J., Söll, D., Lee, H-Y. and Park, H-S. (2016) A chemical biology route to site-specific authentic protein modifications. Science doi: 10.1126/science.aah4428.


Napolitano, M.G., Landon, M.M., Gregg, C.G., Lajoie, M.J., Govindarajan, L.N., Mosberg, J.A., Kuznetsov, G., Goodman, D.B., Vargas-Rodriguez, O., Isaacs, F.J., Söll, D. and Church, G.M. (2016) Emergent rules for codon choice elucidated by editing rare arginine codons in Escherichia coli. Proc. Natl. Acad. Sci. USA, Proc. Natl. Acad. Sci. USA 113, E5588-E5597. Abstract


Dobosz-Bartoszek, M., Pinkerton, M.H., Otwinowski, Z., Söll, D., Copeland, P.R. and Simonović, M. (2016) Crystal structures of the human elongation factor eEFSec suggest a non-canonical mechanism for selenocysteine incorporation. Nat. Commun., 7, 12941 Abstract


Fan, C., Ip, K., Söll, D. (2016) Expanding the genetic code of Escherichia coli with phosphotyrosine. FEBS letters, 590, 3040-3047 Abstract


Hepowit, N.L., de Vera, I.M., Cao, S., Fu, X., Wu, Y., Uthandi, S., Chavarria, N.E., Englert, M., Su, D., Söll, D., Kojetin, D.J., Maupin-Furlow, J.A. (2016) Mechanistic insight into protein modification and sulfur mobilization activities of noncanonical E1 and associated ubiquitin-like proteins of Archaea. FEBS J. 283, 3567-3586.  Abstract


Polikanov, Y.S., Melnikov, S.V., Söll, D. and Steitz, T.A. (2016) Insights into RNA binding by the anticancer drug cisplatin from the crystal structure of cisplatin-modified ribosome. Nucleic Acids Res. 44, 4978-4987. Abstract


Mukai, T., Englert, M., Tripp, H.J., Miller, C., Ivanova, N.N., Rubin, E.M., Kyrpides, N.C. and Söll, D. (2016) Leichte Neucodierung von Selenocystein in der Natur. Angew. Chem. 128, 5423-5427. Abstract


Melo Czekster, C., Robertson, W., Walker, A., Söll, D. and Schepartz, A. (2016) In vivo biosynthesis of a beta-amino acid-containing protein. J. Am. Chem. Soc. 138, 5194-5197. Abstract


Mukai, T., Englert, M., Tripp, H.J., Miller, C., Ivanova, N.N., Rubin, E.M., Kyrpides, N.C. and Söll, D. (2016) Facile recoding of selenocysteine in nature. Angew. Chem. Int. Ed. Engl. 55, 5337-5341. Abstract


Xiong, H., Reynolds, N.M., Fan, C., Englert, M., Hoyer, D., Miller, S.J. and Söll, D. (2016) Duale genetische Kodierung von Acetyllysin und nicht-hydrolysierbarem Thioacetyllysin mittels Flexizym. Angew. Chem. 128, 4151-4154. Abstract


Lajoie, M.J., Söll, D. and Church, G.M. (2016) Overcoming challenges in engineering the genetic code. J. Mol. Biol. 428, 1004-1021. Abstract


Xiong, H., Reynolds, N.M., Fan, C., Englert, M., Hoyer, D., Miller, S.J. and Söll, D. (2016) Dual genetic encoding of acetyl-lysine and non-deacetylatable thioacetyl-lysine mediated by flexizyme. Angew. Chem. Int. Ed. Engl. 55, 4083-4086. Abstract


Ho, J.M.L., Reynolds, N.M., Rivera, K., Connolly, M., Guo, L-T., Ling, J., Pappin, D., Church, G.M. and Söll, D. (2016) Efficient reassignment of a frequent serine codon in wildtype Escherichia coli. ACS Synth. Biol. 5, 163-171. Abstract